Text mode clock synchronization
authorBenjamin Poirier <benjamin.poirier@polymtl.ca>
Fri, 10 Jul 2009 15:31:47 +0000 (11:31 -0400)
committerBenjamin Poirier <benjamin.poirier@polymtl.ca>
Fri, 18 Dec 2009 19:03:24 +0000 (14:03 -0500)
Adds linear regression based clock correction of a group of traces. This is
mostly a reimplementation of the work presented in
[1] Clément, E.: Synchronisation de traces dans un réseau distribué, École
Polytechnique de montréal, 2006

This implementation does not use a synchronization "window" and timeouts as
described in figure 3.3 of [1]. Not using that algorithm, we don't have to
rely on the system time to be loosely synchronized; events can be processed
regardless of the order the traces are merge-sorted. The downside is that
there is no limit to the number of events that could be queued up, waiting for
their matching event from another trace. The solution to this would be to
insert extra logic (like a plugable module) that controls the merge-sort;
upstream of event delivery to the syncrhonization code. Many possibilities
come to mind:
1) reimplement something like what is found in [1] that relies on system time
for a weak pre-synchronization
2) use a heuristic based on the size of the current queue for each trace in
the synchronization code. If a trace's queue is growing and growing, deliver
events to other traces.

This implementation also does not need to keep track of the IP adresses
assigned to local interfaces. If a packet is processed by the network
subsystem it can be used for synchronization. There is no need to know if the
node really the packet's final destination.

Signed-off-by: Benjamin Poirier <benjamin.poirier@polymtl.ca>
configure.ac
lttv/lttv/Makefile.am
lttv/lttv/lookup3.h [new file with mode: 0644]
lttv/lttv/sync.c [new file with mode: 0644]
lttv/lttv/sync.h [new file with mode: 0644]
lttv/lttv/tracecontext.c
lttv/lttv/tracecontext.h
lttv/modules/text/batchAnalysis.c

index a52a7046df140da49a98cc929266d04db19a6196..7a94867171076f71400eb1fb59e9fc27dda71ab6 100644 (file)
@@ -65,7 +65,7 @@ AC_PROG_CC
 
 # Checks for libraries.
 AC_CHECK_LIB([popt], [poptGetNextOpt], POPT_LIBS="-lpopt",AC_MSG_ERROR([libpopt is required in order to compile LinuxTraceToolkit])  )
-#AC_CHECK_LIB([m], [round], M_LIBS="-lm",AC_MSG_ERROR([Mathematical libraries are missing.])  )
+AC_CHECK_LIB([m], [round], M_LIBS="-lm",AC_MSG_ERROR([Mathematical libraries are missing.])  )
 
 AC_CHECK_LIB([util], [forkpty], UTIL_LIBS="-lutil", AC_MSG_ERROR([
 libutil is required in order to compile LinuxTraceToolkit]))
index 14be7bed009fb99f1e94ae0ac79a21156f666bb1..a522a33b9f36aeae639a4d9e381a6cb7633ad567 100644 (file)
@@ -1,5 +1,5 @@
 AM_CFLAGS= $(PACKAGE_CFLAGS)
-LDADD = $(POPT_LIBS) ${top_builddir}/ltt/liblttvtraceread.la
+LDADD = $(POPT_LIBS) $(M_LIBS) ${top_builddir}/ltt/liblttvtraceread.la
 
 bin_PROGRAMS = lttv.real
 
@@ -51,6 +51,7 @@ lttv_real_SOURCES = \
        stats.c\
        tracecontext.c\
        traceset.c\
+       sync.c\
        filter.c\
        print.c
 
diff --git a/lttv/lttv/lookup3.h b/lttv/lttv/lookup3.h
new file mode 100644 (file)
index 0000000..f4a4273
--- /dev/null
@@ -0,0 +1,143 @@
+/*
+-------------------------------------------------------------------------------
+lookup3.c, by Bob Jenkins, May 2006, Public Domain.
+
+These are functions for producing 32-bit hashes for hash table lookup.
+hashword(), hashlittle(), hashlittle2(), hashbig(), mix(), and final()
+are externally useful functions.  Routines to test the hash are included
+if SELF_TEST is defined.  You can use this free for any purpose.  It's in
+the public domain.  It has no warranty.
+
+You probably want to use hashlittle().  hashlittle() and hashbig()
+hash byte arrays.  hashlittle() is is faster than hashbig() on
+little-endian machines.  Intel and AMD are little-endian machines.
+On second thought, you probably want hashlittle2(), which is identical to
+hashlittle() except it returns two 32-bit hashes for the price of one.
+You could implement hashbig2() if you wanted but I haven't bothered here.
+
+If you want to find a hash of, say, exactly 7 integers, do
+  a = i1;  b = i2;  c = i3;
+  mix(a,b,c);
+  a += i4; b += i5; c += i6;
+  mix(a,b,c);
+  a += i7;
+  final(a,b,c);
+then use c as the hash value.  If you have a variable length array of
+4-byte integers to hash, use hashword().  If you have a byte array (like
+a character string), use hashlittle().  If you have several byte arrays, or
+a mix of things, see the comments above hashlittle().
+
+Why is this so big?  I read 12 bytes at a time into 3 4-byte integers,
+then mix those integers.  This is fast (you can do a lot more thorough
+mixing with 12*3 instructions on 3 integers than you can with 3 instructions
+on 1 byte), but shoehorning those bytes into integers efficiently is messy.
+-------------------------------------------------------------------------------
+*/
+
+/*
+ * Only minimal parts kept, see http://burtleburtle.net/bob/hash/doobs.html for
+ * full file and great info.
+ */
+
+#ifndef LOOKUP_H
+#define LOOKUP_H
+
+#include <stdint.h>     /* defines uint32_t etc */
+
+
+#define rot(x,k) (((x)<<(k)) | ((x)>>(32-(k))))
+
+
+/*
+-------------------------------------------------------------------------------
+mix -- mix 3 32-bit values reversibly.
+
+This is reversible, so any information in (a,b,c) before mix() is
+still in (a,b,c) after mix().
+
+If four pairs of (a,b,c) inputs are run through mix(), or through
+mix() in reverse, there are at least 32 bits of the output that
+are sometimes the same for one pair and different for another pair.
+This was tested for:
+* pairs that differed by one bit, by two bits, in any combination
+  of top bits of (a,b,c), or in any combination of bottom bits of
+  (a,b,c).
+* "differ" is defined as +, -, ^, or ~^.  For + and -, I transformed
+  the output delta to a Gray code (a^(a>>1)) so a string of 1's (as
+  is commonly produced by subtraction) look like a single 1-bit
+  difference.
+* the base values were pseudorandom, all zero but one bit set, or
+  all zero plus a counter that starts at zero.
+
+Some k values for my "a-=c; a^=rot(c,k); c+=b;" arrangement that
+satisfy this are
+    4  6  8 16 19  4
+    9 15  3 18 27 15
+   14  9  3  7 17  3
+Well, "9 15 3 18 27 15" didn't quite get 32 bits diffing
+for "differ" defined as + with a one-bit base and a two-bit delta.  I
+used http://burtleburtle.net/bob/hash/avalanche.html to choose
+the operations, constants, and arrangements of the variables.
+
+This does not achieve avalanche.  There are input bits of (a,b,c)
+that fail to affect some output bits of (a,b,c), especially of a.  The
+most thoroughly mixed value is c, but it doesn't really even achieve
+avalanche in c.
+
+This allows some parallelism.  Read-after-writes are good at doubling
+the number of bits affected, so the goal of mixing pulls in the opposite
+direction as the goal of parallelism.  I did what I could.  Rotates
+seem to cost as much as shifts on every machine I could lay my hands
+on, and rotates are much kinder to the top and bottom bits, so I used
+rotates.
+-------------------------------------------------------------------------------
+*/
+#define mix(a,b,c) \
+{ \
+  a -= c;  a ^= rot(c, 4);  c += b; \
+  b -= a;  b ^= rot(a, 6);  a += c; \
+  c -= b;  c ^= rot(b, 8);  b += a; \
+  a -= c;  a ^= rot(c,16);  c += b; \
+  b -= a;  b ^= rot(a,19);  a += c; \
+  c -= b;  c ^= rot(b, 4);  b += a; \
+}
+
+
+/*
+-------------------------------------------------------------------------------
+final -- final mixing of 3 32-bit values (a,b,c) into c
+
+Pairs of (a,b,c) values differing in only a few bits will usually
+produce values of c that look totally different.  This was tested for
+* pairs that differed by one bit, by two bits, in any combination
+  of top bits of (a,b,c), or in any combination of bottom bits of
+  (a,b,c).
+* "differ" is defined as +, -, ^, or ~^.  For + and -, I transformed
+  the output delta to a Gray code (a^(a>>1)) so a string of 1's (as
+  is commonly produced by subtraction) look like a single 1-bit
+  difference.
+* the base values were pseudorandom, all zero but one bit set, or
+  all zero plus a counter that starts at zero.
+
+These constants passed:
+ 14 11 25 16 4 14 24
+ 12 14 25 16 4 14 24
+and these came close:
+  4  8 15 26 3 22 24
+ 10  8 15 26 3 22 24
+ 11  8 15 26 3 22 24
+-------------------------------------------------------------------------------
+*/
+#define final(a,b,c) \
+{ \
+  c ^= b; c -= rot(b,14); \
+  a ^= c; a -= rot(c,11); \
+  b ^= a; b -= rot(a,25); \
+  c ^= b; c -= rot(b,16); \
+  a ^= c; a -= rot(c,4);  \
+  b ^= a; b -= rot(a,14); \
+  c ^= b; c -= rot(b,24); \
+}
+
+
+#endif
diff --git a/lttv/lttv/sync.c b/lttv/lttv/sync.c
new file mode 100644 (file)
index 0000000..1379b41
--- /dev/null
@@ -0,0 +1,1986 @@
+/* This file is part of the Linux Trace Toolkit viewer
+ * Copyright (C) 2008 Benjamin Poirier <benjamin.poirier@polymtl.ca>
+ * This program is free software; you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License Version 2 as
+ * published by the Free Software Foundation;
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place - Suite 330, Boston,
+ * MA 02111-1307, USA.
+ */
+
+// for INFINITY in math.h
+#define _ISOC99_SOURCE
+
+#ifdef HAVE_CONFIG_H
+#include <config.h>
+#endif
+
+#include <arpa/inet.h>
+#include <fcntl.h>
+#include <glib.h>
+#include <limits.h>
+#include <linux/if_ether.h>
+#include <math.h>
+#include <netinet/in.h>
+#include <stdint.h>
+#include <stdio.h>
+#include <stdlib.h>
+#include <sys/resource.h>
+#include <sys/socket.h>
+#include <sys/stat.h>
+#include <sys/time.h>
+#include <sys/types.h>
+#include <unistd.h>
+
+#include <lttv/module.h>
+#include <lttv/option.h>
+
+#include "lookup3.h"
+
+#include "sync.h"
+
+
+GQuark
+       LTT_CHANNEL_NET,
+       LTT_CHANNEL_NETIF_STATE;
+
+GQuark
+       LTT_EVENT_DEV_HARD_START_XMIT_TCP,
+       LTT_EVENT_DEV_RECEIVE,
+       LTT_EVENT_PKFREE_SKB,
+       LTT_EVENT_TCPV4_RCV,
+       LTT_EVENT_NETWORK_IPV4_INTERFACE;
+
+GQuark
+       LTT_FIELD_SKB,
+       LTT_FIELD_PROTOCOL,
+       LTT_FIELD_SADDR,
+       LTT_FIELD_DADDR,
+       LTT_FIELD_TOT_LEN,
+       LTT_FIELD_IHL,
+       LTT_FIELD_SOURCE,
+       LTT_FIELD_DEST,
+       LTT_FIELD_SEQ,
+       LTT_FIELD_ACK_SEQ,
+       LTT_FIELD_DOFF,
+       LTT_FIELD_ACK,
+       LTT_FIELD_RST,
+       LTT_FIELD_SYN,
+       LTT_FIELD_FIN,
+       LTT_FIELD_NAME,
+    LTT_FIELD_ADDRESS,
+    LTT_FIELD_UP;
+
+static gboolean optionSync;
+static gboolean optionSyncStats;
+static char* optionSyncData;
+
+/*
+ * Module init function
+ */
+static void init()
+{
+       g_debug("\t\t\tXXXX sync init\n");
+
+       LTT_CHANNEL_NET= g_quark_from_string("net");
+       LTT_CHANNEL_NETIF_STATE= g_quark_from_string("netif_state");
+
+       LTT_EVENT_DEV_HARD_START_XMIT_TCP=
+               g_quark_from_string("dev_hard_start_xmit_tcp");
+       LTT_EVENT_DEV_RECEIVE= g_quark_from_string("dev_receive");
+       LTT_EVENT_PKFREE_SKB= g_quark_from_string("pkfree_skb");
+       LTT_EVENT_TCPV4_RCV= g_quark_from_string("tcpv4_rcv");
+       LTT_EVENT_NETWORK_IPV4_INTERFACE=
+               g_quark_from_string("network_ipv4_interface");
+
+       LTT_FIELD_SKB= g_quark_from_string("skb");
+       LTT_FIELD_PROTOCOL= g_quark_from_string("protocol");
+       LTT_FIELD_SADDR= g_quark_from_string("saddr");
+       LTT_FIELD_DADDR= g_quark_from_string("daddr");
+       LTT_FIELD_TOT_LEN= g_quark_from_string("tot_len");
+       LTT_FIELD_IHL= g_quark_from_string("ihl");
+       LTT_FIELD_SOURCE= g_quark_from_string("source");
+       LTT_FIELD_DEST= g_quark_from_string("dest");
+       LTT_FIELD_SEQ= g_quark_from_string("seq");
+       LTT_FIELD_ACK_SEQ= g_quark_from_string("ack_seq");
+       LTT_FIELD_DOFF= g_quark_from_string("doff");
+       LTT_FIELD_ACK= g_quark_from_string("ack");
+       LTT_FIELD_RST= g_quark_from_string("rst");
+       LTT_FIELD_SYN= g_quark_from_string("syn");
+       LTT_FIELD_FIN= g_quark_from_string("fin");
+       LTT_FIELD_NAME= g_quark_from_string("name");
+       LTT_FIELD_ADDRESS= g_quark_from_string("address");
+       LTT_FIELD_UP= g_quark_from_string("up");
+
+       optionSync= FALSE;
+       lttv_option_add("sync", '\0', "synchronize the time between tracefiles "
+               "based on network communications", "none", LTTV_OPT_NONE, &optionSync,
+               NULL, NULL);
+
+       optionSyncStats= FALSE;
+       lttv_option_add("sync-stats", '\0', "print statistics about the time "
+               "synchronization", "none", LTTV_OPT_NONE, &optionSyncStats, NULL, NULL);
+
+       optionSyncData= NULL;
+       lttv_option_add("sync-data", '\0', "save information about every offset "
+               "identified", "pathname of the file where to save the offsets",
+               LTTV_OPT_STRING, &optionSyncData, NULL, NULL);
+}
+
+
+/*
+ * Module unload function
+ */
+static void destroy()
+{
+       g_debug("\t\t\tXXXX sync destroy\n");
+
+       lttv_option_remove("sync");
+       lttv_option_remove("sync-stats");
+       lttv_option_remove("sync-data");
+}
+
+
+/*
+ * Calculate a traceset's drift and offset values based on network events
+ *
+ * Args:
+ *   tsc:          traceset
+ */
+void sync_traceset(LttvTracesetContext* const tsc)
+{
+       SyncState* syncState;
+       struct timeval startTime, endTime;
+       struct rusage startUsage, endUsage;
+       int retval;
+
+       if (optionSync == FALSE)
+       {
+               g_debug("Not synchronizing traceset because option is disabled");
+               return;
+       }
+
+       if (optionSyncStats)
+       {
+               gettimeofday(&startTime, 0);
+               getrusage(RUSAGE_SELF, &startUsage);
+       }
+
+       // Initialize data structures
+       syncState= malloc(sizeof(SyncState));
+       syncState->tsc= tsc;
+       syncState->traceNb= lttv_traceset_number(tsc->ts);
+
+       if (optionSyncStats)
+       {
+               syncState->stats= calloc(1, sizeof(Stats));
+       }
+
+       if (optionSyncData)
+       {
+               syncState->dataFd= fopen(optionSyncData, "w");
+               if (syncState->dataFd == NULL)
+               {
+                       perror(0);
+                       goto out_free;
+               }
+
+               fprintf(syncState->dataFd, "%10s %10s %21s %21s %21s\n", "ni", "nj",
+                       "timoy", "dji", "eji");
+       }
+
+       // Process traceset
+       registerHooks(syncState);
+
+       lttv_process_traceset_seek_time(tsc, ltt_time_zero);
+       lttv_process_traceset_middle(tsc, ltt_time_infinite, G_MAXULONG, NULL);
+       lttv_process_traceset_seek_time(tsc, ltt_time_zero);
+
+       unregisterHooks(syncState);
+
+       // Finalize the least-squares analysis
+       finalizeLSA(syncState);
+
+       // Find a reference node and structure nodes in a graph
+       doGraphProcessing(syncState);
+
+       // Calculate the resulting offset and drift between each trace and its
+       // reference and write those values to the LttTrace structures
+       calculateFactors(syncState);
+
+       if (optionSyncData)
+       {
+               retval= fclose(syncState->dataFd);
+               if (retval != 0)
+               {
+                       perror(0);
+               }
+       }
+
+out_free:
+       if (optionSyncStats)
+       {
+               printf("Stats:\n");
+               // Received frames
+               printf("\ttotal received packets: %d\n", syncState->stats->totRecv);
+               // Received frames that are ip
+               printf("\ttotal received IP packets: %d\n",
+                       syncState->stats->totRecvIp);
+               // Processed packets that are tcp
+               printf("\ttotal input events: %d\n", syncState->stats->totInE);
+               // Sent packets that are tcp
+               printf("\ttotal output events: %d\n", syncState->stats->totOutE);
+               // Input and output events were matched together
+               printf("\ttotal packets identified: %d\n",
+                       syncState->stats->totPacket);
+               printf("\ttotal packets identified needing an acknowledge: %d\n",
+                       syncState->stats->totPacketNeedAck);
+               // Four events are matched
+               printf("\ttotal packets fully acknowledged: %d\n",
+                       syncState->stats->totExchangeEffective);
+               // Many packets were acknowledged at once
+               printf("\ttotal packets cummulatively acknowledged (excluding the "
+                       "first in each series): %d\n",
+                       syncState->stats->totPacketCummAcked);
+               // Offset calculations that could be done, some effective exchanges are
+               // not used when there is cummulative acknowledge
+               printf("\ttotal exchanges identified: %d\n",
+                       syncState->stats->totExchangeReal);
+
+               free(syncState->stats);
+       }
+       free(syncState);
+
+       if (optionSyncStats)
+       {
+               gettimeofday(&endTime, 0);
+               retval= getrusage(RUSAGE_SELF, &endUsage);
+
+               timeDiff(&endTime, &startTime);
+               timeDiff(&endUsage.ru_utime, &startUsage.ru_utime);
+               timeDiff(&endUsage.ru_stime, &startUsage.ru_stime);
+
+               printf("Synchronization time:\n");
+               printf("\treal time: %ld.%06ld\n", endTime.tv_sec, endTime.tv_usec);
+               printf("\tuser time: %ld.%06ld\n", endUsage.ru_utime.tv_sec, endUsage.ru_utime.tv_usec);
+               printf("\tsystem time: %ld.%06ld\n", endUsage.ru_stime.tv_sec, endUsage.ru_stime.tv_usec);
+       }
+}
+
+
+/*
+ * Allocate and initialize data structures for synchronizing a traceset.
+ * Register event hooks.
+ *
+ * Args:
+ *   syncState:    container for synchronization data.
+ *                 This function allocates theses members:
+ *                 traceNumTable
+ *                 hookListList
+ *                 pendingRecv
+ *                 unMatchedInE
+ *                 unMatchedOutE
+ *                 unAcked
+ *                 fitArray
+ */
+void registerHooks(SyncState* const syncState)
+{
+       unsigned int i, j, k;
+
+       // Allocate lists
+       syncState->pendingRecv= g_hash_table_new_full(NULL, NULL, NULL,
+               &netEventListDestroy);
+       syncState->unMatchedInE= g_hash_table_new_full(&netEventPacketHash,
+               &netEventPacketEqual, NULL, &ghtDestroyNetEvent);
+       syncState->unMatchedOutE= g_hash_table_new_full(&netEventPacketHash,
+               &netEventPacketEqual, NULL, &ghtDestroyNetEvent);
+       syncState->unAcked= g_hash_table_new_full(&connectionHash,
+               &connectionEqual, &connectionDestroy, &packetListDestroy);
+
+       syncState->fitArray= malloc(syncState->traceNb * sizeof(Fit*));
+       for (i= 0; i < syncState->traceNb; i++)
+       {
+               syncState->fitArray[i]= calloc(syncState->traceNb, sizeof(Fit));
+       }
+
+       syncState->traceNumTable= g_hash_table_new(&g_direct_hash,
+               &g_direct_equal);
+
+       syncState->hookListList= g_array_sized_new(FALSE, FALSE, sizeof(GArray*),
+               syncState->traceNb);
+
+       // Add event hooks and initialize traceNumTable
+       // note: possibilité de remettre le code avec lttv_trace_find_marker_ids (voir r328)
+       for(i= 0; i < syncState->traceNb; i++)
+       {
+               guint old_len;
+               LttvTraceContext* tc;
+               GArray* hookList;
+               const int hookNb= 5;
+               int retval;
+
+               hookList= g_array_sized_new(FALSE, FALSE, sizeof(LttvTraceHook), hookNb);
+               g_array_append_val(syncState->hookListList, hookList);
+
+               tc= syncState->tsc->traces[i];
+
+               g_hash_table_insert(syncState->traceNumTable, tc->t, (gpointer) i);
+
+               // Find the hooks
+               old_len= hookList->len;
+               retval= lttv_trace_find_hook(tc->t, LTT_CHANNEL_NET,
+                       LTT_EVENT_DEV_HARD_START_XMIT_TCP,
+                       FIELD_ARRAY(LTT_FIELD_SKB, LTT_FIELD_SADDR,
+                               LTT_FIELD_DADDR, LTT_FIELD_TOT_LEN,
+                               LTT_FIELD_IHL, LTT_FIELD_SOURCE,
+                               LTT_FIELD_DEST, LTT_FIELD_SEQ,
+                               LTT_FIELD_ACK_SEQ, LTT_FIELD_DOFF,
+                               LTT_FIELD_ACK, LTT_FIELD_RST, LTT_FIELD_SYN,
+                               LTT_FIELD_FIN), process_event_by_id,
+                       syncState, &hookList);
+               if (retval != 0)
+               {
+                       g_warning("Trace %d contains no %s.%s marker\n", i,
+                               g_quark_to_string(LTT_CHANNEL_NET),
+                               g_quark_to_string(LTT_EVENT_DEV_HARD_START_XMIT_TCP));
+               }
+               else
+               {
+                       g_assert(hookList->len - old_len == 1);
+               }
+
+               old_len= hookList->len;
+               retval= lttv_trace_find_hook(tc->t, LTT_CHANNEL_NET,
+                       LTT_EVENT_DEV_RECEIVE, FIELD_ARRAY(LTT_FIELD_SKB,
+                               LTT_FIELD_PROTOCOL), process_event_by_id, syncState, &hookList);
+               if (retval != 0)
+               {
+                       g_warning("Trace %d contains no %s.%s marker\n", i,
+                               g_quark_to_string(LTT_CHANNEL_NET),
+                               g_quark_to_string(LTT_EVENT_DEV_RECEIVE));
+               }
+               else
+               {
+                       g_assert(hookList->len - old_len == 1);
+               }
+
+               old_len= hookList->len;
+               retval= lttv_trace_find_hook(tc->t, LTT_CHANNEL_NET,
+                       LTT_EVENT_PKFREE_SKB, FIELD_ARRAY(LTT_FIELD_SKB),
+                       process_event_by_id, syncState, &hookList);
+               if (retval != 0)
+               {
+                       g_warning("Trace %d contains no %s.%s marker\n", i,
+                               g_quark_to_string(LTT_CHANNEL_NET),
+                               g_quark_to_string(LTT_EVENT_PKFREE_SKB));
+               }
+               else
+               {
+                       g_assert(hookList->len - old_len == 1);
+               }
+
+               old_len= hookList->len;
+               retval= lttv_trace_find_hook(tc->t, LTT_CHANNEL_NET, LTT_EVENT_TCPV4_RCV,
+                       FIELD_ARRAY(LTT_FIELD_SKB, LTT_FIELD_SADDR, LTT_FIELD_DADDR,
+                               LTT_FIELD_TOT_LEN, LTT_FIELD_IHL, LTT_FIELD_SOURCE,
+                               LTT_FIELD_DEST, LTT_FIELD_SEQ, LTT_FIELD_ACK_SEQ,
+                               LTT_FIELD_DOFF, LTT_FIELD_ACK, LTT_FIELD_RST, LTT_FIELD_SYN,
+                               LTT_FIELD_FIN), process_event_by_id, syncState, &hookList);
+               if (retval != 0)
+               {
+                       g_warning("Trace %d contains no %s.%s marker\n", i,
+                               g_quark_to_string(LTT_CHANNEL_NET),
+                               g_quark_to_string(LTT_EVENT_TCPV4_RCV));
+               }
+               else
+               {
+                       g_assert(hookList->len - old_len == 1);
+               }
+
+               old_len= hookList->len;
+               retval= lttv_trace_find_hook(tc->t, LTT_CHANNEL_NETIF_STATE,
+                       LTT_EVENT_NETWORK_IPV4_INTERFACE, FIELD_ARRAY(LTT_FIELD_NAME,
+                               LTT_FIELD_ADDRESS, LTT_FIELD_UP), process_event_by_id, syncState,
+                       &hookList);
+               if (retval != 0)
+               {
+                       g_warning("Trace %d contains no %s.%s marker\n", i,
+                               g_quark_to_string(LTT_CHANNEL_NETIF_STATE),
+                               g_quark_to_string(LTT_EVENT_NETWORK_IPV4_INTERFACE));
+               }
+               else
+               {
+                       g_assert(hookList->len - old_len == 1);
+               }
+
+               // Add the hooks to each tracefile's event_by_id hook list
+               for(j= 0; j < tc->tracefiles->len; j++)
+               {
+                       LttvTracefileContext* tfc;
+
+                       tfc= g_array_index(tc->tracefiles, LttvTracefileContext*, j);
+
+                       for(k= 0; k < hookList->len; k++)
+                       {
+                               LttvTraceHook* trace_hook;
+
+                               trace_hook= &g_array_index(hookList, LttvTraceHook, k);
+                               if (trace_hook->hook_data != syncState)
+                               {
+                                       g_assert_not_reached();
+                               }
+                               if (trace_hook->mdata == tfc->tf->mdata)
+                               {
+                                       lttv_hooks_add(lttv_hooks_by_id_find(tfc->event_by_id,
+                                                       trace_hook->id),
+                                               trace_hook->h, trace_hook,
+                                               LTTV_PRIO_DEFAULT);
+                               }
+                       }
+               }
+       }
+}
+
+
+/*
+ * Unregister event hooks. Deallocate some data structures that are not needed
+ * anymore after running the hooks.
+ * Args:
+ *   syncState:    container for synchronization data.
+ *                 This function deallocates theses members:
+ *                 hookListList
+ *                 pendingRecv
+ *                 unMatchedInE
+ *                 unMatchedOutE
+ *                 unAcked
+ */
+void unregisterHooks(SyncState* const syncState)
+{
+       unsigned int i, j, k;
+
+       // Remove event hooks
+       for(i= 0; i < syncState->traceNb; i++)
+       {
+               LttvTraceContext* tc;
+               GArray* hookList;
+
+               tc= syncState->tsc->traces[i];
+               hookList= g_array_index(syncState->hookListList, GArray*, i);
+
+               // Remove the hooks from each tracefile's event_by_id hook list
+               for(j= 0; j < tc->tracefiles->len; j++)
+               {
+                       LttvTracefileContext* tfc;
+
+                       tfc= g_array_index(tc->tracefiles, LttvTracefileContext*, j);
+
+                       for(k= 0; k < hookList->len; k++)
+                       {
+                               LttvTraceHook* trace_hook;
+
+                               trace_hook= &g_array_index(hookList, LttvTraceHook, k);
+                               if (trace_hook->mdata == tfc->tf->mdata)
+                               {
+                                       lttv_hooks_remove_data(lttv_hooks_by_id_find(tfc->event_by_id,
+                                                       trace_hook->id), trace_hook->h, trace_hook);
+                               }
+                       }
+               }
+
+               g_array_free(hookList, TRUE);
+       }
+
+       g_array_free(syncState->hookListList, TRUE);
+
+       // Free lists
+       g_debug("Cleaning up pendingRecv list\n");
+       g_hash_table_destroy(syncState->pendingRecv);
+       g_debug("Cleaning up unMatchedInE list\n");
+       g_hash_table_destroy(syncState->unMatchedInE);
+       g_debug("Cleaning up unMatchedOutE list\n");
+       g_hash_table_destroy(syncState->unMatchedOutE);
+       g_debug("Cleaning up unAcked list\n");
+       g_hash_table_destroy(syncState->unAcked);
+}
+
+
+/*
+ * Finalize the least-squares analysis. The intermediate values in the fit
+ * array are used to calculate the drift and the offset between each pair of
+ * nodes based on their exchanges.
+ *
+ * Args:
+ *   syncState:    container for synchronization data.
+ */
+void finalizeLSA(SyncState* const syncState)
+{
+       unsigned int i, j;
+
+       if (optionSyncStats)
+       {
+               printf("Individual synchronization factors:\n");
+       }
+
+       for (i= 0; i < syncState->traceNb; i++)
+       {
+               for (j= 0; j < syncState->traceNb; j++)
+               {
+                       if (i != j)
+                       {
+                               Fit* fit;
+                               double delta;
+
+                               fit= &syncState->fitArray[i][j];
+
+                               delta= fit->n * fit->st2 - pow(fit->st, 2);
+                               fit->x= (fit->n * fit->std - fit->st * fit->sd) / delta;
+                               fit->d0= (fit->st2 * fit->sd - fit->st * fit->std) / delta;
+                               fit->e= sqrt((fit->sd2 - (fit->n * pow(fit->std, 2) +
+                                                       pow(fit->sd, 2) * fit->st2 - 2 * fit->st * fit->sd
+                                                       * fit->std) / delta) / (fit->n - 2));
+
+                               g_debug("[i= %u j= %u]\n", i, j);
+                               g_debug("n= %d st= %g st2= %g sd= %g sd2= %g std= %g\n",
+                                       fit->n, fit->st, fit->st2, fit->sd, fit->sd2, fit->std);
+                               g_debug("xij= %g d0ij= %g e= %g\n", fit->x, fit->d0, fit->e);
+                               g_debug("(xji= %g d0ji= %g)\n", -fit->x / (1 + fit->x),
+                                       -fit->d0 / (1 + fit->x));
+                       }
+               }
+       }
+
+       if (optionSyncStats)
+       {
+               for (i= 0; i < syncState->traceNb; i++)
+               {
+                       for (j= 0; j < syncState->traceNb; j++)
+                       {
+                               if (i < j)
+                               {
+                                       Fit* fit;
+
+                                       fit= &syncState->fitArray[i][j];
+                                       printf("\tbetween trace i= %u and j= %u, xij= %g d0ij= %g "
+                                               "e= %g\n", i, j, fit->x, fit->d0, fit->e);
+
+                                       fit= &syncState->fitArray[j][i];
+                                       printf("\tbetween trace i= %u and j= %u, xij= %g d0ij= %g "
+                                               "e= %g\n", j, i, fit->x, fit->d0, fit->e);
+                               }
+                       }
+               }
+       }
+}
+
+
+/*
+ * Structure nodes in graphs of nodes that had exchanges. Each graph has a
+ * reference node, the one that can reach the others with the smallest
+ * cummulative error.
+ *
+ * Args:
+ *   syncState:    container for synchronization data.
+ *                 This function allocates these members:
+ *                 graphList
+ */
+void doGraphProcessing(SyncState* const syncState)
+{
+       unsigned int i, j;
+       double* distances;
+       unsigned int* previousVertex;
+
+       distances= malloc(syncState->traceNb * sizeof(double));
+       previousVertex= malloc(syncState->traceNb * sizeof(unsigned int));
+       syncState->graphList= g_queue_new();
+
+       for (i= 0; i < syncState->traceNb; i++)
+       {
+               double errorSum;
+               GList* result;
+
+               // Perform shortest path search
+               g_debug("shortest path trace %d\ndistances: ", i);
+               shortestPath(syncState->fitArray, i, syncState->traceNb, distances,
+                       previousVertex);
+
+               for (j= 0; j < syncState->traceNb; j++)
+               {
+                       g_debug("%g, ", distances[j]);
+               }
+               g_debug("\npreviousVertex: ");
+               for (j= 0; j < syncState->traceNb; j++)
+               {
+                       g_debug("%u, ", previousVertex[j]);
+               }
+               g_debug("\n");
+
+               // Group in graphs nodes that have exchanges
+               errorSum= sumDistances(distances, syncState->traceNb);
+               result= g_queue_find_custom(syncState->graphList, &i,
+                       &graphTraceCompare);
+               if (result != NULL)
+               {
+                       Graph* graph;
+
+                       g_debug("found graph\n");
+                       graph= (Graph*) result->data;
+                       if (errorSum < graph->errorSum)
+                       {
+                               g_debug("adding to graph\n");
+                               graph->errorSum= errorSum;
+                               free(graph->previousVertex);
+                               graph->previousVertex= previousVertex;
+                               graph->reference= i;
+                               previousVertex= malloc(syncState->traceNb * sizeof(unsigned
+                                               int));
+                       }
+               }
+               else
+               {
+                       Graph* newGraph;
+
+                       g_debug("creating new graph\n");
+                       newGraph= malloc(sizeof(Graph));
+                       newGraph->errorSum= errorSum;
+                       newGraph->previousVertex= previousVertex;
+                       newGraph->reference= i;
+                       previousVertex= malloc(syncState->traceNb * sizeof(unsigned int));
+
+                       g_queue_push_tail(syncState->graphList, newGraph);
+               }
+       }
+
+       free(previousVertex);
+       free(distances);
+}
+
+
+/*
+ * Calculate the resulting offset and drift between each trace and its
+ * reference and write those values to the LttTrace structures. Also free
+ * structures that are not needed anymore.
+ *
+ * Args:
+ *   syncState:    container for synchronization data.
+ *                 This function deallocates:
+ *                 traceNumTable
+ *                 fitArray
+ *                 graphList
+ */
+void calculateFactors(SyncState* const syncState)
+{
+       unsigned int i, j;
+       double minOffset;
+
+       // Calculate the resulting offset and drift between each trace and its
+       // reference
+       g_info("Factors:\n");
+       if (optionSyncStats)
+       {
+               printf("Resulting synchronization factors:\n");
+       }
+
+       minOffset= 0;
+       for (i= 0; i < syncState->traceNb; i++)
+       {
+               GList* result;
+
+               result= g_queue_find_custom(syncState->graphList, &i,
+                       &graphTraceCompare);
+               if (result != NULL)
+               {
+                       Graph* graph;
+                       double drift, offset, stDev;
+                       LttTrace* t;
+
+                       t= syncState->tsc->traces[i]->t;
+                       graph= (Graph*) result->data;
+
+                       g_info("trace %u (%p) graph: reference %u\n", i, t, graph->reference);
+
+                       for (j= 0; j < syncState->traceNb; j++)
+                       {
+                               g_info("%u, ", graph->previousVertex[j]);
+                       }
+                       g_info("\n");
+
+                       factors(syncState->fitArray, graph->previousVertex, i, &drift,
+                               &offset, &stDev);
+                       t->drift= drift;
+                       t->offset= offset;
+                       t->start_time_from_tsc =
+                               ltt_time_from_uint64(tsc_to_uint64(t->freq_scale,
+                                               t->start_freq, drift * t->start_tsc + offset));
+
+                       if (optionSyncStats)
+                       {
+                               if (i == graph->reference)
+                               {
+                                       printf("\ttrace %u reference %u previous vertex - "
+                                               "stdev= %g\n", i,
+                                               graph->reference, stDev);
+                               }
+                               else
+                               {
+                                       printf("\ttrace %u reference %u previous vertex %u "
+                                               "stdev= %g\n", i,
+                                               graph->reference,
+                                               graph->previousVertex[i],
+                                               stDev);
+                               }
+                       }
+
+                       if (offset < minOffset)
+                       {
+                               minOffset= offset;
+                       }
+               }
+               else
+               {
+                       fprintf(stderr, "trace: %d\n", i);
+                       g_assert_not_reached();
+               }
+       }
+
+       // Adjust all offsets so the lowest one is 0 (no negative offsets)
+       for (i= 0; i < syncState->traceNb; i++)
+       {
+               LttTrace* t;
+
+               t= syncState->tsc->traces[i]->t;
+               t->offset-= minOffset;
+               t->start_time_from_tsc =
+                       ltt_time_from_uint64(tsc_to_uint64(t->freq_scale,
+                                       t->start_freq, t->drift * t->start_tsc
+                                       + t->offset));
+
+               g_info("trace %u drift: %f offset: %g start_time: %ld.%09ld\n",
+                       i, t->drift, t->offset, t->start_time_from_tsc.tv_sec,
+                       t->start_time_from_tsc.tv_nsec);
+
+               if (optionSyncStats)
+               {
+                       printf("\ttrace %u drift= %g offset= %g (%f)\n", i,
+                               t->drift, t->offset,
+                               tsc_to_uint64(t->freq_scale, t->start_freq,
+                                       t->offset) / 1e9);
+               }
+       }
+
+       lttv_traceset_context_compute_time_span(syncState->tsc,
+               &syncState->tsc->time_span);
+
+       g_debug("traceset start %ld.%09ld end %ld.%09ld\n",
+               syncState->tsc->time_span.start_time.tv_sec,
+               syncState->tsc->time_span.start_time.tv_nsec,
+               syncState->tsc->time_span.end_time.tv_sec,
+               syncState->tsc->time_span.end_time.tv_nsec);
+
+       g_queue_foreach(syncState->graphList, &graphRemove, NULL);
+       g_queue_free(syncState->graphList);
+
+       for (i= 0; i < syncState->traceNb; i++)
+       {
+               free(syncState->fitArray[i]);
+       }
+       free(syncState->fitArray);
+
+       g_hash_table_destroy(syncState->traceNumTable);
+}
+
+
+/*
+ * Lttv hook function that will be called for network events
+ *
+ * Args:
+ *   hook_data:    LttvTraceHook* for the type of event that generated the call
+ *   call_data:    LttvTracefileContext* at the moment of the event
+ *
+ * Returns:
+ *   FALSE         Always returns FALSE, meaning to keep processing hooks for
+ *                 this event
+ */
+static gboolean process_event_by_id(void* hook_data, void* call_data)
+{
+       LttvTraceHook* trace_hook;
+       LttvTracefileContext* tfc;
+       LttEvent* event;
+       LttTime time;
+       LttCycleCount tsc;
+       LttTrace* trace;
+       struct marker_info* info;
+       SyncState* syncState;
+
+       trace_hook= (LttvTraceHook*) hook_data;
+       tfc= (LttvTracefileContext*) call_data;
+       syncState= (SyncState*) trace_hook->hook_data;
+       event= ltt_tracefile_get_event(tfc->tf);
+       time= ltt_event_time(event);
+       tsc= ltt_event_cycle_count(event);
+       trace= tfc->t_context->t;
+       info= marker_get_info_from_id(tfc->tf->mdata, event->event_id);
+
+       g_debug("XXXX process event: time: %ld.%09ld trace: %p name: %s ",
+               (long) time.tv_sec, time.tv_nsec, trace,
+               g_quark_to_string(info->name));
+
+       if (info->name == LTT_EVENT_DEV_HARD_START_XMIT_TCP)
+       {
+               NetEvent* outE;
+
+               if (optionSyncStats)
+               {
+                       syncState->stats->totOutE++;
+               }
+
+               outE= malloc(sizeof(NetEvent));
+
+               outE->packet= NULL;
+               outE->trace= trace;
+               outE->tsc= tsc;
+
+               matchEvents(outE, syncState->unMatchedOutE, syncState->unMatchedInE,
+                       event, trace_hook, offsetof(Packet, outE));
+
+               g_debug("Output event done\n");
+       }
+       else if (info->name == LTT_EVENT_DEV_RECEIVE)
+       {
+               NetEvent* inE;
+               guint64 protocol;
+
+               if (optionSyncStats)
+               {
+                       syncState->stats->totRecv++;
+               }
+
+               protocol= ltt_event_get_long_unsigned(event,
+                       lttv_trace_get_hook_field(trace_hook, 1));
+
+               if (protocol == ETH_P_IP)
+               {
+                       GQueue* list;
+
+                       if (optionSyncStats)
+                       {
+                               syncState->stats->totRecvIp++;
+                       }
+
+                       inE= malloc(sizeof(NetEvent));
+
+                       inE->packet= NULL;
+                       inE->trace= trace;
+                       inE->tsc= tsc;
+                       inE->skb= (void*) (unsigned long)
+                               ltt_event_get_long_unsigned(event,
+                                       lttv_trace_get_hook_field(trace_hook, 0));
+
+                       list= g_hash_table_lookup(syncState->pendingRecv, trace);
+                       if (unlikely(list == NULL))
+                       {
+                               g_hash_table_insert(syncState->pendingRecv, trace, list=
+                                       g_queue_new());
+                       }
+                       g_queue_push_head(list, inE);
+
+                       g_debug("Adding inE to pendingRecv\n");
+               }
+               else
+               {
+                       g_debug("\n");
+               }
+       }
+       else if (info->name == LTT_EVENT_TCPV4_RCV)
+       {
+               GQueue* prList;
+
+               // Search pendingRecv for an event with the same skb
+               prList= g_hash_table_lookup(syncState->pendingRecv, trace);
+               if (unlikely(prList == NULL))
+               {
+                       g_debug("No pending receive event list for this trace\n");
+               }
+               else
+               {
+                       NetEvent tempInE;
+                       GList* result;
+
+                       tempInE.skb= (void*) (unsigned long)
+                               ltt_event_get_long_unsigned(event,
+                                       lttv_trace_get_hook_field(trace_hook, 0));
+                       result= g_queue_find_custom(prList, &tempInE, &netEventSkbCompare);
+
+                       if (result == NULL)
+                       {
+                               g_debug("No matching pending receive event found\n");
+                       }
+                       else
+                       {
+                               NetEvent* inE;
+
+                               if (optionSyncStats)
+                               {
+                                       syncState->stats->totInE++;
+                               }
+
+                               // If it's there, remove it and proceed with a receive event
+                               inE= (NetEvent*) result->data;
+                               g_queue_delete_link(prList, result);
+
+                               matchEvents(inE, syncState->unMatchedInE,
+                                       syncState->unMatchedOutE, event, trace_hook,
+                                       offsetof(Packet, inE));
+
+                               g_debug("Input event done\n");
+                       }
+               }
+       }
+       else if (info->name == LTT_EVENT_PKFREE_SKB)
+       {
+               GQueue* list;
+
+               list= g_hash_table_lookup(syncState->pendingRecv, trace);
+               if (unlikely(list == NULL))
+               {
+                       g_debug("No pending receive event list for this trace\n");
+               }
+               else
+               {
+                       NetEvent tempInE;
+                       GList* result;
+
+                       tempInE.skb= (void*) (unsigned long)
+                               ltt_event_get_long_unsigned(event,
+                                       lttv_trace_get_hook_field(trace_hook, 0));
+                       result= g_queue_find_custom(list, &tempInE, &netEventSkbCompare);
+
+                       if (result == NULL)
+                       {
+                               g_debug("No matching pending receive event found, \"shaddow"
+                                       "skb\"\n");
+                       }
+                       else
+                       {
+                               NetEvent* inE;
+
+                               inE= (NetEvent*) result->data;
+                               g_queue_delete_link(list, result);
+                               destroyNetEvent(inE);
+
+                               g_debug("Non-TCP skb\n");
+                       }
+               }
+       }
+       else if (info->name == LTT_EVENT_NETWORK_IPV4_INTERFACE)
+       {
+               char* name;
+               guint64 address;
+               gint64 up;
+               char addressString[17];
+
+               name= ltt_event_get_string(event, lttv_trace_get_hook_field(trace_hook,
+                               0));
+               address= ltt_event_get_long_unsigned(event,
+                       lttv_trace_get_hook_field(trace_hook, 1));
+               up= ltt_event_get_long_int(event, lttv_trace_get_hook_field(trace_hook,
+                               2));
+
+               convertIP(addressString, address);
+
+               g_debug("name \"%s\" address %s up %lld\n", name, addressString, up);
+       }
+       else
+       {
+               g_debug("<default>\n");
+       }
+
+       return FALSE;
+}
+
+
+/*
+ * Implementation of a packet matching algorithm for TCP
+ *
+ * Args:
+ *   netEvent      new event to match
+ *   unMatchedList list of unmatched events of the same type (send or receive)
+ *                 as netEvent
+ *   unMatchedOppositeList list of unmatched events of the opposite type of
+ *                 netEvent
+ *   event         event corresponding to netEvent
+ *   trace_hook    trace_hook corresponding to netEvent
+ *   fieldOffset   offset of the NetEvent field in the Packet struct for the
+ *                 field of the type of netEvent
+ */
+static void matchEvents(NetEvent* const netEvent, GHashTable* const
+       unMatchedList, GHashTable* const unMatchedOppositeList, LttEvent* const
+       event, LttvTraceHook* const trace_hook, const size_t fieldOffset)
+{
+       Packet* packet;
+       GQueue* uaList;
+       GList* result;
+       SyncState* syncState;
+       NetEvent* companionEvent;
+
+       syncState= (SyncState*) trace_hook->hook_data;
+
+       // Search unmatched list of opposite type for a matching event
+       packet= malloc(sizeof(Packet));
+       packet->connKey.saddr= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 1));
+       packet->connKey.daddr= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 2));
+       packet->tot_len= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 3));
+       packet->ihl= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 4));
+       packet->connKey.source= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 5));
+       packet->connKey.dest= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 6));
+       packet->seq= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 7));
+       packet->ack_seq= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 8));
+       packet->doff= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 9));
+       packet->ack= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 10));
+       packet->rst= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 11));
+       packet->syn= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 12));
+       packet->fin= ltt_event_get_long_unsigned(event,
+               lttv_trace_get_hook_field(trace_hook, 13));
+       packet->inE= packet->outE= NULL;
+       packet->acks= NULL;
+
+       companionEvent= g_hash_table_lookup(unMatchedOppositeList, packet);
+       if (companionEvent != NULL)
+       {
+               if (optionSyncStats)
+               {
+                       syncState->stats->totPacket++;
+               }
+
+               g_debug("Found matching companion event, ");
+               // If it's there, remove it and update the structures
+               g_hash_table_steal(unMatchedOppositeList, packet);
+               free(packet);
+               packet= companionEvent->packet;
+               *((NetEvent**) ((void*) packet + fieldOffset))= netEvent;
+
+               // If this packet acknowleges some data ...
+               if (isAck(packet))
+               {
+                       uaList= g_hash_table_lookup(syncState->unAcked, &packet->connKey);
+                       if (uaList != NULL)
+                       {
+                               Packet* ackedPacket;
+
+                               result= g_queue_find_custom(uaList, packet, &packetAckCompare);
+
+                               while (result != NULL)
+                               {
+                                       // Remove the acknowledged packet from the unAcked list
+                                       // and keep this packet for later offset calculations
+                                       g_debug("Found matching unAcked packet, ");
+
+                                       ackedPacket= (Packet*) result->data;
+                                       g_queue_delete_link(uaList, result);
+
+                                       // If the acked packet doesn't have both of its events,
+                                       // remove the orphaned event from the corresponding
+                                       // unmatched list and destroy the acked packet (an event
+                                       // was not in the trace)
+                                       if (ackedPacket->inE == NULL)
+                                       {
+                                               g_hash_table_steal(syncState->unMatchedOutE, packet);
+                                               destroyPacket(ackedPacket);
+                                       }
+                                       else if (ackedPacket->outE == NULL)
+                                       {
+                                               g_hash_table_steal(syncState->unMatchedInE, packet);
+                                               destroyPacket(ackedPacket);
+                                       }
+                                       else
+                                       {
+                                               if (optionSyncStats)
+                                               {
+                                                       syncState->stats->totExchangeEffective++;
+                                               }
+
+                                               if (packet->acks == NULL)
+                                               {
+                                                       packet->acks= g_queue_new();
+                                               }
+                                               else if (optionSyncStats)
+                                               {
+                                                       syncState->stats->totPacketCummAcked++;
+                                               }
+
+                                               g_queue_push_tail(packet->acks, ackedPacket);
+                                       }
+
+                                       result= g_queue_find_custom(uaList, packet,
+                                               &packetAckCompare);
+                               }
+
+                               // It might be possible to do an offset calculation
+                               if (packet->acks != NULL)
+                               {
+                                       if (optionSyncStats)
+                                       {
+                                               syncState->stats->totExchangeReal++;
+                                       }
+
+                                       g_debug("Synchronization calculation, ");
+                                       g_debug("%d acked packets - using last one, ",
+                                               g_queue_get_length(packet->acks));
+
+                                       ackedPacket= g_queue_peek_tail(packet->acks);
+                                       if (ackedPacket->outE->trace != packet->inE->trace ||
+                                               ackedPacket->inE->trace != packet->outE->trace)
+                                       {
+                                               g_debug("disorganized exchange - discarding, ");
+                                       }
+                                       else if (ackedPacket->outE->trace ==
+                                               ackedPacket->inE->trace)
+                                       {
+                                               g_debug("packets from the same trace - discarding, ");
+                                       }
+                                       else
+                                       {
+                                               double dji, eji;
+                                               double timoy;
+                                               unsigned int ni, nj;
+                                               LttTrace* orig_key;
+                                               Fit* fit;
+
+                                               // Calculate the intermediate values for the
+                                               // least-squares analysis
+                                               dji= ((double) ackedPacket->inE->tsc - (double)
+                                                       ackedPacket->outE->tsc + (double) packet->outE->tsc
+                                                       - (double) packet->inE->tsc) / 2;
+                                               eji= fabs((double) ackedPacket->inE->tsc - (double)
+                                                       ackedPacket->outE->tsc - (double) packet->outE->tsc
+                                                       + (double) packet->inE->tsc) / 2;
+                                               timoy= ((double) ackedPacket->outE->tsc + (double)
+                                                       packet->inE->tsc) / 2;
+                                               g_assert(g_hash_table_lookup_extended(syncState->traceNumTable,
+                                                               ackedPacket->outE->trace, (gpointer*)
+                                                               &orig_key, (gpointer*) &ni));
+                                               g_assert(g_hash_table_lookup_extended(syncState->traceNumTable,
+                                                               ackedPacket->inE->trace, (gpointer*)
+                                                               &orig_key, (gpointer*) &nj));
+                                               fit= &syncState->fitArray[nj][ni];
+
+                                               fit->n++;
+                                               fit->st+= timoy;
+                                               fit->st2+= pow(timoy, 2);
+                                               fit->sd+= dji;
+                                               fit->sd2+= pow(dji, 2);
+                                               fit->std+= timoy * dji;
+
+                                               g_debug("intermediate values: dji= %f ti moy= %f "
+                                                       "ni= %u nj= %u fit: n= %u st= %f st2= %f sd= %f "
+                                                       "sd2= %f std= %f, ", dji, timoy, ni, nj, fit->n,
+                                                       fit->st, fit->st2, fit->sd, fit->sd2, fit->std);
+
+                                               if (optionSyncData)
+                                               {
+                                                       double freq;
+
+                                                       freq= syncState->tsc->traces[ni]->t->start_freq *
+                                                               syncState->tsc->traces[ni]->t->freq_scale;
+
+                                                       fprintf(syncState->dataFd, "%10u %10u %21.10f %21.10f %21.10f\n", ni,
+                                                               nj, timoy / freq, dji / freq, eji / freq);
+                                               }
+                                       }
+                               }
+                       }
+               }
+
+               if (needsAck(packet))
+               {
+                       if (optionSyncStats)
+                       {
+                               syncState->stats->totPacketNeedAck++;
+                       }
+
+                       // If this packet will generate an ack, add it to the unAcked list
+                       g_debug("Adding to unAcked, ");
+                       uaList= g_hash_table_lookup(syncState->unAcked, &packet->connKey);
+                       if (uaList == NULL)
+                       {
+                               ConnectionKey* connKey;
+
+                               connKey= malloc(sizeof(ConnectionKey));
+                               memcpy(connKey, &packet->connKey, sizeof(ConnectionKey));
+                               g_hash_table_insert(syncState->unAcked, connKey, uaList= g_queue_new());
+                       }
+                       g_queue_push_tail(uaList, packet);
+               }
+               else
+               {
+                       destroyPacket(packet);
+               }
+       }
+       else
+       {
+               // If there's no corresponding event, finish creating the data
+               // structures and add an event to the unmatched list for this type of
+               // event
+               netEvent->packet= packet;
+               *((NetEvent**) ((void*) packet + fieldOffset))= netEvent;
+
+               g_debug("Adding to unmatched event list, ");
+               g_hash_table_insert(unMatchedList, packet, netEvent);
+       }
+}
+
+
+/*
+ * Check if a packet is an acknowledge
+ *
+ * Returns:
+ *   true if it is,
+ *   false otherwise
+ */
+static bool isAck(const Packet* const packet)
+{
+       if (packet->ack == 1)
+       {
+               return true;
+       }
+       else
+       {
+               return false;
+       }
+}
+
+
+/*
+ * Check if a packet is an acknowledge of another packet.
+ *
+ * Args:
+ *   ackPacket     packet that is the confirmation
+ *   ackedPacket   packet that contains the original data, both packets have to
+ *                 come from the same connection
+ */
+static bool isAcking(const Packet* const ackPacket, const Packet* const ackedPacket)
+{
+       if (ackedPacket->connKey.saddr == ackPacket->connKey.daddr &&
+               ackedPacket->connKey.daddr == ackPacket->connKey.saddr &&
+               ackedPacket->connKey.source == ackPacket->connKey.dest &&
+               ackedPacket->connKey.dest == ackPacket->connKey.source &&
+               ackPacket->ack_seq > ackedPacket->seq)
+       {
+               return true;
+       }
+       else
+       {
+               return false;
+       }
+}
+
+
+/*
+ * Check if a packet will increment the sequence number, thus needing an
+ * acknowledge
+ *
+ * Returns:
+ *   true if the packet will need an acknowledge
+ *   false otherwise
+ */
+static bool needsAck(const Packet* const packet)
+{
+       if (packet->syn || packet->fin || packet->tot_len - packet->ihl * 4 -
+               packet->doff * 4 > 0)
+       {
+               return true;
+       }
+       else
+       {
+               return false;
+       }
+}
+
+
+/*
+ * Compare two ConnectionKey structures
+ *
+ * Returns:
+ *   true if each field of the structure is equal
+ *   false otherwise
+ */
+static bool connectionKeyEqual(const ConnectionKey* const a, const ConnectionKey* const b)
+{
+       if (a->saddr == b->saddr && a->daddr == b->daddr && a->source ==
+               b->source && a->dest == b->dest)
+       {
+               return true;
+       }
+       else
+       {
+               return false;
+       }
+}
+
+
+/*
+ * A GDestroyNotify function for g_hash_table_new_full()
+ *
+ * Args:
+ *   data:         GQueue* list[NetEvent]
+ */
+static void netEventListDestroy(gpointer data)
+{
+       GQueue* list;
+
+       list= (GQueue*) data;
+
+       g_debug("XXXX netEventListDestroy\n");
+       g_queue_foreach(list, &netEventRemove, NULL);
+       g_queue_free(list);
+}
+
+
+/*
+ * A GFunc for g_queue_foreach()
+ *
+ * Args:
+ *   data:         NetEvent* event
+ *   user_data:    NULL
+ */
+static void netEventRemove(gpointer data, gpointer user_data)
+{
+       destroyNetEvent((NetEvent*) data);
+}
+
+
+/*
+ * A GHashFunc for g_hash_table_new()
+ *
+ * This function is for indexing netEvents in unMatched lists. All fields of
+ * the corresponding packet must match for two keys to be equal.
+ *
+ * Args:
+ *    key        Packet*
+ */
+static guint netEventPacketHash(gconstpointer key)
+{
+       const Packet* p;
+       uint32_t a, b, c;
+
+       p= key;
+
+       a= p->connKey.source + (p->connKey.dest << 16);
+       b= p->connKey.saddr;
+       c= p->connKey.daddr;
+       mix(a, b, c);
+
+       a+= p->tot_len;
+       b+= p->ihl;
+       c+= p->seq;
+       mix(a, b, c);
+
+       a+= p->ack_seq;
+       b+= p->doff;
+       c+= p->ack;
+       mix(a, b, c);
+
+       a+= p->rst;
+       b+= p->syn;
+       c+= p->fin;
+       final(a, b, c);
+
+       return c;
+}
+
+
+/*
+ * A GEqualFunc for g_hash_table_new()
+ *
+ * This function is for indexing netEvents in unMatched lists. All fields of
+ * the corresponding packet must match for two keys to be equal.
+ *
+ * Args:
+ *   a, b          Packet*
+ *
+ * Returns:
+ *   TRUE if both values are equal
+ */
+static gboolean netEventPacketEqual(gconstpointer a, gconstpointer b)
+{
+       const Packet* pA, * pB;
+
+       pA= a;
+       pB= b;
+
+       if (connectionKeyEqual(&pA->connKey, &pB->connKey) &&
+               pA->tot_len == pB->tot_len &&
+               pA->ihl == pB->ihl &&
+               pA->seq == pB->seq &&
+               pA->ack_seq == pB->ack_seq &&
+               pA->doff == pB->doff &&
+               pA->ack == pB->ack &&
+               pA->rst == pB->rst &&
+               pA->syn == pB->syn &&
+               pA->fin == pB->fin)
+       {
+               return TRUE;
+       }
+       else
+       {
+               return FALSE;
+       }
+}
+
+
+/*
+ * A GDestroyNotify function for g_hash_table_new_full()
+ *
+ * Args:
+ *   data:         NetEvent*
+ */
+static void ghtDestroyNetEvent(gpointer data)
+{
+       destroyNetEvent((NetEvent*) data);
+}
+
+
+/*
+ * A GDestroyNotify function for g_hash_table_new_full()
+ *
+ * Args:
+ *   data:         GQueue* list[Packet]
+ */
+static void packetListDestroy(gpointer data)
+{
+       GQueue* list;
+
+       list= (GQueue*) data;
+
+       g_debug("XXXX packetListDestroy\n");
+
+       g_queue_foreach(list, &packetRemove, NULL);
+       g_queue_free(list);
+}
+
+
+/*
+ * A GFunc for g_queue_foreach()
+ *
+ * Args:
+ *   data          Packet*, packet to destroy
+ *   user_data     NULL
+ */
+static void packetRemove(gpointer data, gpointer user_data)
+{
+       Packet* packet;
+
+       packet= (Packet*) data;
+
+       g_debug("XXXX packetRemove\n");
+       destroyPacket(packet);
+}
+
+
+/*
+ * Free the memory used by a Packet and the memory of all its associated
+ * resources
+ */
+static void destroyPacket(Packet* const packet)
+{
+       g_debug("XXXX destroyPacket ");
+       printPacket(packet);
+       g_debug("\n");
+
+       if (packet->inE)
+       {
+               free(packet->inE);
+       }
+
+       if (packet->outE)
+       {
+               free(packet->outE);
+       }
+
+       if (packet->acks)
+       {
+               g_queue_foreach(packet->acks, &packetRemove, NULL);
+               g_queue_free(packet->acks);
+       }
+
+       free(packet);
+}
+
+
+/*
+ * Free the memory used by a NetEvent and the memory of all its associated
+ * resources. If the netEvent is part of a packet that also contains the other
+ * netEvent, that one will be freed also. Beware not to keep references to that
+ * other one.
+ */
+static void destroyNetEvent(NetEvent* const event)
+{
+       g_debug("XXXX destroyNetEvent\n");
+       if (event->packet)
+       {
+               destroyPacket(event->packet);
+       }
+       else
+       {
+               free(event);
+       }
+}
+
+
+/*
+ * A GFunc for g_queue_foreach()
+ *
+ * Args:
+ *   data          Graph*, graph to destroy
+ *   user_data     NULL
+ */
+static void graphRemove(gpointer data, gpointer user_data)
+{
+       Graph* graph;
+
+       graph= (Graph*) data;
+
+       free(graph->previousVertex);
+       free(graph);
+}
+
+
+/*
+ * A GCompareFunc for g_queue_find_custom()
+ *
+ * Args:
+ *   a:            NetEvent*
+ *   b:            NetEvent*
+ *
+ * Returns
+ *   0 if the two events have the same skb
+ */
+static gint netEventSkbCompare(gconstpointer a, gconstpointer b)
+{
+       if (((NetEvent*) a)->skb == ((NetEvent*) b)->skb)
+       {
+               return 0;
+       }
+       else
+       {
+               return 1;
+       }
+}
+
+
+/*
+ * A GCompareFunc to be used with g_queue_find_custom()
+ *
+ * Args:
+ *   a             NetEvent*
+ *   b             NetEvent*
+ *
+ * Returns:
+ *   0 if the two net events correspond to the send and receive events of the
+ *   same packet
+ */
+static gint netEventPacketCompare(gconstpointer a, gconstpointer b)
+{
+       Packet* pA, * pB;
+
+       pA= ((NetEvent*) a)->packet;
+       pB= ((NetEvent*) b)->packet;
+
+       if (netEventPacketEqual(a, b))
+       {
+               return 0;
+       }
+       else
+       {
+               return 1;
+       }
+}
+
+
+/*
+ * A GCompareFunc for g_queue_find_custom()
+ *
+ * Args:
+ *   a          Packet* acked packet
+ *   b          Packet* ack packet
+ *
+ * Returns:
+ *   0 if b acks a
+ */
+static gint packetAckCompare(gconstpointer a, gconstpointer b)
+{
+       if (isAcking(((Packet*) b), ((Packet*) a)))
+       {
+               return 0;
+       }
+       else
+       {
+               return 1;
+       }
+}
+
+
+/*
+ * A GCompareFunc for g_queue_find_custom()
+ *
+ * Args:
+ *   a:            Graph* graph
+ *   b:            unsigned int* traceNum
+ *
+ * Returns:
+ *   0 if graph contains traceNum
+ */
+static gint graphTraceCompare(gconstpointer a, gconstpointer b)
+{
+       Graph* graph;
+       unsigned int traceNum;
+
+       graph= (Graph*) a;
+       traceNum= *(unsigned int *) b;
+
+       if (graph->previousVertex[traceNum] != UINT_MAX)
+       {
+               return 0;
+       }
+       else if (graph->reference == traceNum)
+       {
+               return 0;
+       }
+       else
+       {
+               return 1;
+       }
+}
+
+
+/*
+ * A GHashFunc for g_hash_table_new()
+ *
+ * 2.4 kernels used tcp_hashfn(),
+ *
+ * I've seen something about an XOR hash:
+ * http://tservice.net.ru/~s0mbre/blog/2006/05/14#2006_05_14:
+ * unsigned int h = (laddr ^ lport) ^ (faddr ^ fport);
+ * h ^= h >> 16;
+ * h ^= h >> 8;
+ * return h;
+ *
+ * and in 2.6 kernels inet_ehashfn() handles connection hashing with the help of
+ * Jenkins hashing, jhash.h
+ *
+ * This function uses the XOR method.
+ *
+ * Args:
+ *    key        ConnectionKey*
+ */
+static guint connectionHash(gconstpointer key)
+{
+       ConnectionKey* connKey;
+       guint result;
+
+       connKey= (ConnectionKey*) key;
+
+       result= (connKey->saddr ^ connKey->source) ^ (connKey->daddr ^ connKey->dest);
+       result^= result >> 16;
+       result^= result >> 8;
+
+       return result;
+}
+
+
+/*
+ * A GEqualFunc for g_hash_table_new()
+ *
+ * Args:
+ *   a, b          ConnectionKey*
+ *
+ * Returns:
+ *   TRUE if both values are equal
+ */
+static gboolean connectionEqual(gconstpointer a, gconstpointer b)
+{
+       ConnectionKey* ckA, * ckB;
+
+       ckA= (ConnectionKey*) a;
+       ckB= (ConnectionKey*) b;
+
+       // Two packets in the same direction
+       if (ckA->saddr == ckB->saddr && ckA->daddr == ckB->daddr && ckA->source ==
+               ckB->source && ckA->dest == ckB->dest)
+       {
+               return TRUE;
+       }
+       // Two packets in opposite directions
+       else if (ckA->saddr == ckB->daddr && ckA->daddr == ckB->saddr &&
+               ckA->source == ckB->dest && ckA->dest == ckB->source)
+       {
+               return TRUE;
+       }
+       else
+       {
+               return FALSE;
+       }
+}
+
+
+/*
+ * A GDestroyNotify function for g_hash_table_new_full()
+ *
+ * Args:
+ *   data:         ConnectionKey*
+ */
+static void connectionDestroy(gpointer data)
+{
+       free((ConnectionKey*) data);
+}
+
+
+/*
+ * Convert an IP address from 32 bit form to dotted quad
+ *
+ * Args:
+ *   str:          A preallocated string of length >= 17
+ *   addr:         Address
+ */
+static void convertIP(char* const str, const uint32_t addr)
+{
+       struct in_addr iaddr;
+
+       iaddr.s_addr= htonl(addr);
+       strcpy(str, inet_ntoa(iaddr));
+}
+
+
+/*
+ * Print the content of a Packet structure
+ */
+static void printPacket(const Packet* const packet)
+{
+       char saddr[17], daddr[17];
+
+       convertIP(saddr, packet->connKey.saddr);
+       convertIP(daddr, packet->connKey.daddr);
+       g_debug("%s:%u to %s:%u tot_len: %u ihl: %u seq: %u ack_seq: %u doff: %u "
+               "ack: %u rst: %u syn: %u fin: %u", saddr, packet->connKey.source,
+               daddr, packet->connKey.dest, packet->tot_len, packet->ihl, packet->seq,
+               packet->ack_seq, packet->doff, packet->ack, packet->rst, packet->syn,
+               packet->fin);
+}
+
+
+/*
+ * Single-source shortest path search to find the path with the lowest error to
+ * convert one node's time to another.
+ * Uses Dijkstra's algorithm
+ *
+ * Args:
+ *   fitArray:     array with the regression parameters
+ *   traceNum:     reference node
+ *   traceNb:      number of traces = number of nodes
+ *   distances:    array of computed distance from source node to node i,
+ *                 INFINITY if i is unreachable, preallocated to the number of
+ *                 nodes
+ *   previousVertex: previous vertex from a node i on the way to the source,
+ *                 UINT_MAX if i is not on the way or is the source,
+ *                 preallocated to the number of nodes
+ */
+static void shortestPath(Fit* const* const fitArray, const unsigned int
+       traceNum, const unsigned int traceNb, double* const distances, unsigned
+       int* const previousVertex)
+{
+       bool* visited;
+       unsigned int i, j;
+
+       visited= malloc(traceNb * sizeof(bool));
+
+       for (i= 0; i < traceNb; i++)
+       {
+               const Fit* fit;
+
+               visited[i]= false;
+
+               fit= &fitArray[traceNum][i];
+               g_debug("fitArray[traceNum= %u][i= %u]->n = %u\n", traceNum, i, fit->n);
+               if (fit->n > 0)
+               {
+                       distances[i]= fit->e;
+                       previousVertex[i]= traceNum;
+               }
+               else
+               {
+                       distances[i]= INFINITY;
+                       previousVertex[i]= UINT_MAX;
+               }
+       }
+       visited[traceNum]= true;
+
+       for (j= 0; j < traceNb; j++)
+       {
+               g_debug("(%d, %u, %g), ", visited[j], previousVertex[j], distances[j]);
+       }
+       g_debug("\n");
+
+       for (i= 0; i < traceNb - 2; i++)
+       {
+               unsigned int v;
+               double dvMin;
+
+               dvMin= INFINITY;
+               for (j= 0; j < traceNb; j++)
+               {
+                       if (visited[j] == false && distances[j] < dvMin)
+                       {
+                               v= j;
+                               dvMin= distances[j];
+                       }
+               }
+
+               g_debug("v= %u dvMin= %g\n", v, dvMin);
+
+               if (dvMin != INFINITY)
+               {
+                       visited[v]= true;
+
+                       for (j= 0; j < traceNb; j++)
+                       {
+                               const Fit* fit;
+
+                               fit= &fitArray[v][j];
+                               if (visited[j] == false && fit->n > 0 && distances[v] + fit->e
+                                       < distances[j])
+                               {
+                                       distances[j]= distances[v] + fit->e;
+                                       previousVertex[j]= v;
+                               }
+                       }
+               }
+               else
+               {
+                       break;
+               }
+
+               for (j= 0; j < traceNb; j++)
+               {
+                       g_debug("(%d, %u, %g), ", visited[j], previousVertex[j], distances[j]);
+               }
+               g_debug("\n");
+       }
+
+       free(visited);
+}
+
+
+/*
+ * Cummulate the distances between a reference node and the other nodes
+ * reachable from it in a graph.
+ *
+ * Args:
+ *   distances:    array of shortest path distances, with UINT_MAX for
+ *                 unreachable nodes
+ *   traceNb:      number of nodes = number of traces
+ */
+static double sumDistances(const double* const distances, const unsigned int traceNb)
+{
+       unsigned int i;
+       double result;
+
+       result= 0;
+       for (i= 0; i < traceNb; i++)
+       {
+               if (distances[i] != INFINITY)
+               {
+                       result+= distances[i];
+               }
+       }
+
+       return result;
+}
+
+
+/*
+ * Cummulate the time correction factors between two nodes accross a graph
+ *
+ * With traceNum i, reference node r:
+ * tr= (1 + Xri) * ti + D0ri
+ *   = drift * ti + offset
+ *
+ * Args:
+ *   fitArray:     array with the regression parameters
+ *   previousVertex: previous vertex from a node i on the way to the source,
+ *                 UINT_MAX if i is not on the way or is the source,
+ *                 preallocated to the number of nodes
+ *   traceNum:     end node, the reference depends on previousVertex
+ *   drift:        drift factor
+ *   offset:       offset factor
+ */
+static void factors(Fit* const* const fitArray, const unsigned int* const
+       previousVertex, const unsigned int traceNum, double* const drift, double*
+       const offset, double* const stDev)
+{
+       if (previousVertex[traceNum] == UINT_MAX)
+       {
+               *drift= 1.;
+               *offset= 0.;
+               *stDev= 0.;
+       }
+       else
+       {
+               const Fit* fit;
+               double cummDrift, cummOffset, cummStDev;
+               unsigned int pv;
+
+               pv= previousVertex[traceNum];
+
+               fit= &fitArray[pv][traceNum];
+               factors(fitArray, previousVertex, pv, &cummDrift, &cummOffset, &cummStDev);
+
+               *drift= cummDrift * (1 + fit->x);
+               *offset= cummDrift * fit->d0 + cummOffset;
+               *stDev= fit->x * cummStDev + fit->e;
+       }
+}
+
+
+/*
+ * Calculate the elapsed time between two timeval values
+ *
+ * Args:
+ *   end:          end time, result is also stored in this structure
+ *   start:        start time
+ */
+static void timeDiff(struct timeval* const end, const struct timeval* const start)
+{
+               if (end->tv_usec >= start->tv_usec)
+               {
+                       end->tv_sec-= start->tv_sec;
+                       end->tv_usec-= start->tv_usec;
+               }
+               else
+               {
+                       end->tv_sec= end->tv_sec - start->tv_sec - 1;
+                       end->tv_usec= end->tv_usec - start->tv_usec + 1e6;
+               }
+}
+
+
+LTTV_MODULE("sync", "Synchronize traces", \
+       "Synchronizes a traceset based on the correspondance of network events", \
+       init, destroy)
diff --git a/lttv/lttv/sync.h b/lttv/lttv/sync.h
new file mode 100644 (file)
index 0000000..0581ca6
--- /dev/null
@@ -0,0 +1,183 @@
+/* This file is part of the Linux Trace Toolkit viewer
+ * Copyright (C) 2008 Benjamin Poirier <benjamin.poirier@polymtl.ca>
+ *
+ * This program is free software; you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License Version 2 as
+ * published by the Free Software Foundation;
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 59 Temple Place - Suite 330, Boston,
+ * MA 02111-1307, USA.
+ */
+
+#ifndef SYNC_H
+#define SYNC_H
+
+#include <glib.h>
+#include <stdbool.h>
+#include <stdio.h>
+#include <sys/time.h>
+
+#include <lttv/tracecontext.h>
+#include <lttv/traceset.h>
+
+
+#ifndef g_debug
+#define g_debug(format...) g_log (G_LOG_DOMAIN, G_LOG_LEVEL_DEBUG, format)
+#endif
+
+#ifndef g_info
+#define g_info(format...) g_log (G_LOG_DOMAIN, G_LOG_LEVEL_INFO, format)
+#endif
+
+
+struct _Packet;
+
+typedef struct
+{
+       struct _Packet* packet;
+       LttTrace* trace;
+       LttCycleCount tsc;
+       void* skb;
+} NetEvent;
+
+typedef struct
+{
+       uint32_t saddr, daddr;
+       uint16_t source, dest;
+} ConnectionKey;
+
+typedef struct _Packet
+{
+       ConnectionKey connKey;
+       unsigned int tot_len, ihl, seq, ack_seq, doff, ack, rst, syn, fin;
+       NetEvent* inE, * outE;
+       GQueue* acks;
+} Packet;
+
+typedef struct
+{
+       unsigned int n;
+       // notation: s__: sum of __; __2: __ squared; example sd2: sum of d squared
+       double st, st2, sd, sd2, std, x, d0, e;
+} Fit;
+
+typedef struct
+{
+       double errorSum;
+       unsigned int* previousVertex;
+       unsigned int reference;
+} Graph;
+
+typedef struct
+{
+       int totRecv, totRecvIp, totInE, totOutE, totPacket, totExchangeEffective,
+               totExchangeReal;
+       int totPacketNeedAck, totPacketCummAcked;
+} Stats;
+
+typedef struct
+{
+       LttvTracesetContext* tsc;
+
+       unsigned int traceNb;
+       // unsigned int traceNumTable[trace*]
+       GHashTable* traceNumTable;
+
+       // hookListList conceptually is a two dimensionnal array of LttvTraceHook
+       // elements. It uses GArrays to interface with other lttv functions that
+       // do.
+       GArray* hookListList;
+
+       // inE* pendingRecv[trace]
+       GHashTable* pendingRecv;
+       // inE* unMatchedInE[packet]
+       GHashTable* unMatchedInE;
+       // outE* unMatchedOutE[packet]
+       GHashTable* unMatchedOutE;
+       // packet* unAcked[connKey]
+       GHashTable* unAcked;
+       Fit** fitArray;
+
+       GQueue* graphList;
+
+       FILE* dataFd;
+       Stats* stats;
+} SyncState;
+
+typedef struct
+{
+       LttvTraceHook* traceHook;
+       SyncState* syncState;
+} HookData;
+
+
+static void init();
+static void destroy();
+
+void sync_traceset(LttvTracesetContext* const tsc);
+
+void registerHooks(SyncState* const syncState);
+void unregisterHooks(SyncState* const syncState);
+void finalizeLSA(SyncState* const syncState);
+void doGraphProcessing(SyncState* const syncState);
+void calculateFactors(SyncState* const syncState);
+
+static gboolean process_event_by_id(void* hook_data, void* call_data);
+
+static void matchEvents(NetEvent* const netEvent, GHashTable* const unMatchedList,
+       GHashTable* const unMatchedOppositeList, LttEvent* const event,
+       LttvTraceHook* const trace_hook, const size_t fieldOffset);
+
+static bool isAck(const Packet* const packet);
+static bool isAcking(const Packet* const ackPacket, const Packet* const
+       ackedPacket);
+static bool needsAck(const Packet* const packet);
+
+static bool connectionKeyEqual(const ConnectionKey* const a, const
+       ConnectionKey* const b);
+
+static void netEventListDestroy(gpointer data);
+static void netEventRemove(gpointer data, gpointer user_data);
+
+static guint netEventPacketHash(gconstpointer key);
+static gboolean netEventPacketEqual(gconstpointer a, gconstpointer b);
+static void ghtDestroyNetEvent(gpointer data);
+
+static void packetListDestroy(gpointer data);
+static void packetRemove(gpointer data, gpointer user_data);
+
+static void destroyPacket(Packet* const packet);
+static void destroyNetEvent(NetEvent* const event);
+
+static void graphRemove(gpointer data, gpointer user_data);
+
+static gint netEventSkbCompare(gconstpointer a, gconstpointer b);
+static gint netEventPacketCompare(gconstpointer a, gconstpointer b);
+static gint packetAckCompare(gconstpointer a, gconstpointer b);
+static gint graphTraceCompare(gconstpointer a, gconstpointer b);
+
+static guint connectionHash(gconstpointer key);
+static gboolean connectionEqual(gconstpointer a, gconstpointer b);
+static void connectionDestroy(gpointer data);
+
+static void convertIP(char* const str, const uint32_t addr);
+static void printPacket(const Packet* const packet);
+
+static void shortestPath(Fit* const* const fitArray, const unsigned int
+       traceNum, const unsigned int traceNb, double* const distances, unsigned
+       int* const previousVertex);
+static double sumDistances(const double* const distances, const unsigned int traceNb);
+static void factors(Fit* const* const fitArray, const unsigned int* const
+       previousVertex, const unsigned int traceNum, double* const drift, double*
+       const offset, double* const stDev);
+
+static void timeDiff(struct timeval* const end, const struct timeval* const start);
+
+#endif // SYNC_H
index 0166e9e34c7d02344ad5f4fe32aaeeb4091cd635..48a28eed34f37313efa0243347552e2ffa06d4b6 100644 (file)
@@ -109,9 +109,8 @@ lttv_context_new_tracefile_context(LttvTracesetContext *self)
  *
  * Author : Xang Xiu Yang
  ***************************************************************************/
-static void lttv_traceset_context_compute_time_span(
-                                          LttvTracesetContext *self,
-                                                                 TimeInterval *time_span)
+void lttv_traceset_context_compute_time_span(LttvTracesetContext *self,
+       TimeInterval *time_span)
 {
   LttvTraceset * traceset = self->ts;
   int numTraces = lttv_traceset_number(traceset);
index 5a768b4b931b74d21b9bf3fb985a6d5686da099a..49952d7740a24373e7791ba79db2564ec9081a10 100644 (file)
@@ -223,6 +223,9 @@ void lttv_process_traceset_end(LttvTracesetContext *self,
 
 void lttv_process_traceset_seek_time(LttvTracesetContext *self, LttTime start);
 
+void lttv_traceset_context_compute_time_span(LttvTracesetContext *self,
+       TimeInterval *time_span);
+
 gboolean lttv_process_traceset_seek_position(LttvTracesetContext *self, 
                                         const LttvTracesetContextPosition *pos);
 
index aa30352021670cf5ae83d68db15d6f58c7fa57dd..ca3a92ef78d960eef6d9cf3ff27634c011dcac62 100644 (file)
@@ -89,6 +89,9 @@ static gboolean process_traceset(void *hook_data, void *call_data)
   g_info("BatchAnalysis initialize context");
 
   lttv_context_init(tc, traceset);
+
+  sync_traceset(tc);
+
   lttv_state_add_event_hooks(tc);
   if(a_stats) lttv_stats_add_event_hooks(tscs);
 
@@ -272,4 +275,4 @@ static void destroy()
 
 LTTV_MODULE("batchAnalysis", "Batch processing of a trace", \
     "Run through a trace calling all the registered hooks", \
-    init, destroy, "state", "stats", "option","textFilter")
+    init, destroy, "state", "stats", "option","textFilter", "sync")
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